Plant GARDEN How To ▶︎

JA

EN

Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015829128.1_cds_XP_016503617.1_17145

CDS Infomation

[gene=LOC107821690] [db_xref=GeneID:107821690] [protein=DExH-box ATP-dependent RNA helicase DExH12-like] [protein_id=XP_016503617.1] [location=complement(21880..28371)] [gbkey=CDS]

Sequence

ATGGCCGATTCGGGTGGTGGTGCAGAGGCACATGCACGTATGAAACAGTATGAATACCGA
GCAAACTCAAATCTTACCCTAACCACCGATTCTCGTCGTCCTCGTGATATTCATGAACTG
ACCGGTGAACCTGAGTCTCTTTATGGCAGAATAGACCCCAAAACATTTGGTGATCGAGCT
TACAGAGGTAGACCATCTGAGAAGGATAGGAAGAAAAAGGAGCGGCAATGGGACACACTT
GCCTCTGAGCCTAAAAGACGACGACTTCTTCAGGAAGAAAGTGTTCTTAATTTAACTGAT
GAGGAAGGTGGAGTTTACCAGCCTAAAACTATGGAAACTAGGGCTGCTTATGAAGCCATG
CTCAGCCTTATTCAGCAGCAAATTGGCGGGCAGCCCTTTAGTGTTGTGAGTGGGGCTGCT
GATGAGATATTGGCCGTGTTAAAAGACGGCAACTTTAAGAACCCTGAAAAGAAATTGGAA
ATTCATAAGCTGTTAAACCCTATTTCGGACCAGGTGTTTGATAAGTTGGTGTCGATTGGG
CAACTCATCACTGACTACCAGTTAGATGGCCACGTTGATAGTGATGAAGCTCTTGATTAT
GATGTTGGTGTGGCAGTTGAGTTTGAGGAGAATGAAGACGAAGAAGAAGATGAAGAAAGC
GAGATTGATGATGAAGAGGATGATGATGTTGTGCTGGAAGCCAATGGTTCTGGCTCAATG
CAAATGGGCAGTGGCATTGATGAAGATGAGATGCAGGAGTCGGATGAAGGAATGGCTTTG
AATGTTCAGGACATAGATGCTTATTGGCTTCAAAGAAAGATTTCTCAAGCTTACCAGCAG
CAGATGGATCCGCAACAGAGCCAAAAGCTTGCTGAAGAAGTTCTTAAAATTCTTGCTGAA
AGGGATGATGATCGCCAAGTAGAAACCAAGCTACTGGTTCATCTCCAATTTGACAAGTTC
AGTCTCATCAAATATCTTCTAGGGAACCGGCTTAAGGTAGTATGGTGTACCCGTCTTGCA
AGGGCTGAAGACCAAGAGAAAAGGAAGAGAATTGAAGAAGAGATGTTGGCTTTGGGGCAA
GATCATGCTGCCATATTAGAGCAGTTGCGCGCGACTAGGGTTACAGCAAAAGAGAGGCAG
AAGAAGTTGGAAAAAAACATTAGGGAAGAGGCTCGGTCTCTTAAAGATGAGACTGGTGGT
GTTGATGGTAACGGGGATAGTAAGGCACTTATAGATAGAGATGTTGATAATGGTGGACAG
CATGAGTTGCTTGATCTTGACAGCCTTACATTTCATCAAGGTGGTTTATTGATGTCAAAT
AAGACATTAGAGCTTCCAGCGGGGTCTTATAGGAGTCATAAGAAGGGCTATGAGGAAGTT
CATGTACCAGCATTGAAGTCCAAGCCACTAGCCCCTGGCCAAGAGCTTGTGAAGATATCG
TCCATTCCAGAGTGGGCTCAACCAGTGTTTAGCGGGATGACCCAATTGAACAAGGTGCAG
AGTAAAGTATATGAAACTGCCCTCTTTACCCCAGAGAACATTTTGCTCTGTGCTCCGACT
GGTGCTGGGAAGACCAATGTAGCTATGTTTACTATACTTCAGCAAATTGCACTAAACCGC
AACGAAGATGGATCATTCAACCACAACAATTATAAGATTGTATATGTGGCACCCATGAAA
GCCCTTGTTGCGGAAGTGGTTGGTAATCTCTCCAAGCGGTTGGAACATTATGGTGTCAAG
GTGAAAGAGTTGAGCGGTGATCAAACATTAACTCGTCAACAGATTGAAGAGACTCAAATT
ATTGTGACTACCCCAGAGAAGTGGGATATTATAACAAGAAAGTCAGGCGATCGCACGTAT
ATGCAGCTTGTTAAACTTGTTATTATTGATGAGATACATCTCCTTCATGACAATCGAGGG
CCTGTCCTGGAGAGTATCATTGCGAGAACTGTTAGACAGATTGAAACCACAAAAGAGCAT
ATTCGGCTTGTTGGATTATCAGCAACTCTTCCAAATTATGAGGACGTGGCTGTGTTTTTG
CAAGTTGATCGGAACAAAGGACTCTTTCATTTTGACAATAGCTATAGACCTGTACCGTTG
GCTCAACAGTATATTGGTATTACTGTTAAGAAGCCACTGCAGAGATTCCAGTTGATGAAT
GATGTTTGCTATGAGAAGGTGATTAGTGTTGCAGGAAAGCATCAGGTGCTTATTTTTGTC
CATTCAAGGAAAGAAACAGCTAAAACAGCTCGGGCAATACGGGATACTGCACTTGCTAAT
GACACCCTTGGTAAGTTTTTGAAGGAGGATAGTTTAACTTGGGAAATTCTACAGTCTCAA
ACTGAGCTTATCAAGAGCAATGACCTCAAAGATGTTCTACCATATGGTTTTGCGATTCAC
CATGCGGGGTTGGCTAGAACTGATCGGCAACTTGTGGAGGAGCTTTTTGCTGCTGGCCAT
GTGCAAGTTTTGGTTTCAACAGCAACCTTAGCTTGGGGTGTCAATTTACCTGCACATACT
GTCATTATAAAGGGCACTCAGATATACAATCCTGAAAAAGGAGCCTGGACTGAACTCAGT
CCCCTTGATGTTATGCAGATGCTTGGCCGTGCGGGAAGGCCTCAATATGACACTTATGGT
GAAGGAATCATCATAACTGGACACACACAATTGCAATATTATCTTTCTTTAATGAATCAG
CAGCTTCCTATTGAAAGTCAACTAATATCTAAGTTGCCTGATCAATTGAACGCAGAGATT
GTCCTTGGGACGGTGCAGAATGCCAAAGAGGCATGCAAGTGGCTCCTCTATACTTACCTC
TGTGTTCGAATGCTACGAAATCCCACTCTTTATGGTCTCAAAACTGACTTTGCTTTGGAG
GAAAGGTGTGCTGACTTGGTTCATTCTGCAGCTACATTACTGGACAAAAACAACCTGATT
AAGTATGATAGAAAAAGTGGATATTTTCAGGTGACTGACCTGGGTCGCATTGCTAGCTAT
TACTACATAACTCATGGGACAATTTCCACATACAATGAGCACTTGAAACCGACGATGGGT
GATATTGAGCTTTGTAGACTCTTCTCTCTCAGTGAGGAGTTCAAATATGCAACGGTAAGA
CAAGATGAGAAGATGGAATTGGCAAAGCTTCTGGATCGTGTTCCCATTCCTATCAGAGAG
AGTCTTGAGGAGCCCAGTGCCAAGATCAATGTTCTACTGCAGGCATATATTTCGCAGCTG
AAGCTCGAAGGGTTGTCTTTGTCATCGGACATGGTTTATATAACTCAGAGTGCTGCACGT
CTCATGCGAGCTCTTTTTGAGATAGTTCTGAAAAGAGGATGGGCTCAGTTAGCTGAGAAG
GCCTTGAAATGGTGCAAAATGATAAGCAAAAGGATGTGGAGTGTACAGACACCACTTCGC
CAATTCCATGGCATACCAAATGAGATCTTGATGAAGTTGGAGAAGAAAGATTTGGCTTGG
GAGCGTTATTATGATCTTTCATCACAAGAATTGGGAGAGCTTATCCGGTCCCCAAAGATG
GGAAGGACGTTACACAAGTTTATTCATCAGTTCCCAAAGCTGAACCTCACAGCACATGTT
CAACCAATTACCCGGTCAGTTTTGAGGGTAGAATTGACTATTACACCAGATTTCCGATGG
GACGACAAGGTTCATGGTTTTGTAGAACCTTTCTGGGTGATTGTTGAAGATGATGATGGA
GAATATATTCTTCACTATGAATATTTCATGCTGAAGAAGCAGTATATTGATGAAGACCAT
ACTTTGAACTTCACAGTCCCAATATATGAGCCATTGCCCCCTCAATATTTCATTCGCGTT
GTCTCAGACAGATGGCTAGGGTCCGAAACTGTTTTGCCAGTCTCTTTCCGACACCTGATT
TTGCCTGAAAAATATCCTCCTCCCACCGAGTTACTAGACTTACAACCTCTGCCAATAACT
GCATTGAGGAATCCAGCATATGAAGCACTTTGTCAAGATTTTAAGCATTTCAATCCGGTT
CAGACTCAGGTTTTCACAGTGTTGTACAATTCAGATGACAATGTTTTGGTTGCAGCTCCA
ACTGGTAGTGGGAAGACCATTTGTGCTGAATTTGCCATATTGAGGAATCATCAGAAAGGA
CCTGATAGTGCCATGCGTGCTGTATATATAGCTCCACTAGTGGCTCTTGCCAAGGAGCGA
TTCAGTGATTGGAAGAAGAAATTTGGAGACTCTCTGGGGATGAGAGTTGTTGAATTAACT
GGGGAGACAACCAGTGATCTGAAGCTGTTGGAGAAGGGTCAATTAATTATCAGCACGCCT
GAGAAATGGGATGCTTTATCTCGTCGTTGGAAACAGCGTAAGCATGTTCAGCAAGTCAGT
CTTTTCATAATCGATGAGTTGCATCTGATTGGTGGTCAAGGTGGCCCAATCCTGGAGGTA
ATCGTCTCTCGGATGAGATATATCTCAAGCCAGGTTGAGAACAAGATCCGGATCATCGCT
TTGTCAACTTCCCTAGCTAATGCCAAGGATTTGGGAGAATGGATTGGGGCTACATCTCAT
GGGCTCTTCAACTTTCCTCCTACTGTCAGGCCTGTGCCACTGGAAATACACATTCAGGGT
ATTGATATTGCTAACTTTGAAGCTAGGATGCAAGCCATGACAAAGCCCACATATACTGCA
ATAGTCCGACATGCAAGGAAAGGAAAACCTGCAATCGTGTATGTTCCTACAAGGAAGCAT
GCACGCTTGACTGCCCTAGATCTGATGACTTATTCAAGCATGGACAGCGAAGACACACCT
ATATTTCTGCTACGATCTGCAGACGAGTTGGAGCCTTTTGTCAACAGGATCAATGAATCT
ATGCTGAAGGAGACACTCAAATATGGCGTGGGCTACTTGCATGAGGGATTGAGTGGCAAT
GATCAGGCTATAGTGAAAACATTGTTTGAAACTGGATGGATTCAAGTGTGTGTAATGAAC
AGTACAATGTGTTGGGGAGTAGCAGTATCTGCACATTTGGTGGTGGTCATGGGAACTCAA
TACTATGATGGTAGGGAAAATGCACAGTACACTGATTATCCGGTTACTGATTTGTTGCAG
ATGATGGGTCATGCTAGTCGTCCTCTTGTAGATAGCTCTGGGAAGTGTATCATCCTCTGC
CATGCACCACGGAAGGACTACTATAAGAAGTTCTTGTATGAAGCATTCCCAGTTGAAAGC
CATCTGCAGCACTATCTCCATGACAATTTGAATGCTGAGGTGGTTACTGGAGTTATTCAG
AACAAGCAGGATGCTGTGAATTACCTAACATGGACCTTCATGTACAGAAGGCTGACACAG
AATCCAAATTACTACAATCTGCTGGGTGTTGGTCACAGGCATCTCTCTGACCACCTCTCG
CAGCTGGTGGAGAATGCTATCAGTGACTTGGAGGCAAGCAAATGTGTCGCCGTTGAGGAT
GACTTTTTGCTTTCACCTATGAATCTTGGCAGGATAGCGTCATATTATTATATCAGTTAC
ACGACAATAGAGCGTTTTAACTCTTCTTTGACCTCCAAAACGAAGTTGAAGGGCATGCTG
GAAATATTGGCTTCAGCTTCGGAATATGAACAGTTGCCTATACGACCAGGTGAGGAGGAG
TTGATAAGAAGGTTGATTCATCACCAGCGTTTCTCTTTTGAGAATCCGATATACACAGAT
CCTCACATAAAGGCTAATGCTCTTTTGCAAGCCCATTTCTCTAGGCAAGTGGTGGGTGGC
AATCTCGTTTCTGACCAGCAAGAGGTGCTTGTTTCTGCTACTAGGCTGCTTCAAGCAATG
GTTGATGTTATTTCCAGCAATGGATGGTTTAGTCTAGCAATTCTAGCAATGGAGGTAAGC
CAGATGGTGACACAGGGAATGTGGGTACGTGATTCTGTGCTTCTCCAGGTTCCACACTTC
ACAGAGGAATTGGCTAGCAAGTGCCTAGAAAATCCAGGAAAGAGTATAGAGACAGTGTTT
GATTTAGTGCAGATGAAAGTTGACGAGAAGCGTGAGCTCTTTCAAATGTCGGACTTAGAG
CTTATGGATATTGAACGGTTCTGTAATCGGTTTCCAGACATTGATTTGACATATGATGTG
CTGGAGAGTGATAATGTGAGGGCTGGAGACCATGTAAGTGTGCAGGTAACCCTTGAGCGA
GATATTAAGGGTAGAACAGAGGTTGGGCCTGTTTTTGCACCCAGATATGCTAAAGCCAAG
GAAGAAGGATGGTGGCTTGTTGTTGGCGATACAAAGAGCAACCAATTACTGGCCATTAAG
AGAGTTACGTCCCTCCAAAGGAAGTGTAGTGTCAAGCTGGAGTTTGCTGCGCCTGCAGAA
GCTGGAACGAGGACCTACACACTCTATTTTGTCTGCGACTCTTATTTTCTGGCCTGTGAT
CAGGAATATAGTTTTACTCTTGATGTTAAAGAAGCAATGGCTGAAGATAACAATGGTAAG
AGATTGATGTAG

Peptide Sequence

PEP ID

XP_016503617.1

PEP Infomation

PREDICTED: DExH-box ATP-dependent RNA helicase DExH12-like [Nicotiana tabacum]

Sequence

MADSGGGAEAHARMKQYEYRANSNLTLTTDSRRPRDIHELTGEPESLYGRIDPKTFGDRA
YRGRPSEKDRKKKERQWDTLASEPKRRRLLQEESVLNLTDEEGGVYQPKTMETRAAYEAM
LSLIQQQIGGQPFSVVSGAADEILAVLKDGNFKNPEKKLEIHKLLNPISDQVFDKLVSIG
QLITDYQLDGHVDSDEALDYDVGVAVEFEENEDEEEDEESEIDDEEDDDVVLEANGSGSM
QMGSGIDEDEMQESDEGMALNVQDIDAYWLQRKISQAYQQQMDPQQSQKLAEEVLKILAE
RDDDRQVETKLLVHLQFDKFSLIKYLLGNRLKVVWCTRLARAEDQEKRKRIEEEMLALGQ
DHAAILEQLRATRVTAKERQKKLEKNIREEARSLKDETGGVDGNGDSKALIDRDVDNGGQ
HELLDLDSLTFHQGGLLMSNKTLELPAGSYRSHKKGYEEVHVPALKSKPLAPGQELVKIS
SIPEWAQPVFSGMTQLNKVQSKVYETALFTPENILLCAPTGAGKTNVAMFTILQQIALNR
NEDGSFNHNNYKIVYVAPMKALVAEVVGNLSKRLEHYGVKVKELSGDQTLTRQQIEETQI
IVTTPEKWDIITRKSGDRTYMQLVKLVIIDEIHLLHDNRGPVLESIIARTVRQIETTKEH
IRLVGLSATLPNYEDVAVFLQVDRNKGLFHFDNSYRPVPLAQQYIGITVKKPLQRFQLMN
DVCYEKVISVAGKHQVLIFVHSRKETAKTARAIRDTALANDTLGKFLKEDSLTWEILQSQ
TELIKSNDLKDVLPYGFAIHHAGLARTDRQLVEELFAAGHVQVLVSTATLAWGVNLPAHT
VIIKGTQIYNPEKGAWTELSPLDVMQMLGRAGRPQYDTYGEGIIITGHTQLQYYLSLMNQ
QLPIESQLISKLPDQLNAEIVLGTVQNAKEACKWLLYTYLCVRMLRNPTLYGLKTDFALE
ERCADLVHSAATLLDKNNLIKYDRKSGYFQVTDLGRIASYYYITHGTISTYNEHLKPTMG
DIELCRLFSLSEEFKYATVRQDEKMELAKLLDRVPIPIRESLEEPSAKINVLLQAYISQL
KLEGLSLSSDMVYITQSAARLMRALFEIVLKRGWAQLAEKALKWCKMISKRMWSVQTPLR
QFHGIPNEILMKLEKKDLAWERYYDLSSQELGELIRSPKMGRTLHKFIHQFPKLNLTAHV
QPITRSVLRVELTITPDFRWDDKVHGFVEPFWVIVEDDDGEYILHYEYFMLKKQYIDEDH
TLNFTVPIYEPLPPQYFIRVVSDRWLGSETVLPVSFRHLILPEKYPPPTELLDLQPLPIT
ALRNPAYEALCQDFKHFNPVQTQVFTVLYNSDDNVLVAAPTGSGKTICAEFAILRNHQKG
PDSAMRAVYIAPLVALAKERFSDWKKKFGDSLGMRVVELTGETTSDLKLLEKGQLIISTP
EKWDALSRRWKQRKHVQQVSLFIIDELHLIGGQGGPILEVIVSRMRYISSQVENKIRIIA
LSTSLANAKDLGEWIGATSHGLFNFPPTVRPVPLEIHIQGIDIANFEARMQAMTKPTYTA
IVRHARKGKPAIVYVPTRKHARLTALDLMTYSSMDSEDTPIFLLRSADELEPFVNRINES
MLKETLKYGVGYLHEGLSGNDQAIVKTLFETGWIQVCVMNSTMCWGVAVSAHLVVVMGTQ
YYDGRENAQYTDYPVTDLLQMMGHASRPLVDSSGKCIILCHAPRKDYYKKFLYEAFPVES
HLQHYLHDNLNAEVVTGVIQNKQDAVNYLTWTFMYRRLTQNPNYYNLLGVGHRHLSDHLS
QLVENAISDLEASKCVAVEDDFLLSPMNLGRIASYYYISYTTIERFNSSLTSKTKLKGML
EILASASEYEQLPIRPGEEELIRRLIHHQRFSFENPIYTDPHIKANALLQAHFSRQVVGG
NLVSDQQEVLVSATRLLQAMVDVISSNGWFSLAILAMEVSQMVTQGMWVRDSVLLQVPHF
TEELASKCLENPGKSIETVFDLVQMKVDEKRELFQMSDLELMDIERFCNRFPDIDLTYDV
LESDNVRAGDHVSVQVTLERDIKGRTEVGPVFAPRYAKAKEEGWWLVVGDTKSNQLLAIK
RVTSLQRKCSVKLEFAAPAEAGTRTYTLYFVCDSYFLACDQEYSFTLDVKEAMAEDNNGK
RLM

Transcript Sequence

Gene sequence data has not been registered.